maintainers.RmdIf you’re a Bioconductor package maintainer and would like help
converting your package’s Sweave vignettes to .Rmd, you’re
welcome to open an issue in your GitHub repository and ask
@Bioconductor/sweave2rmd to convert specific files.
We will put your request on our Sweave2rmd
Project Board. We will convert the files to .Rmd. The
new vignette will be rendered in HTML. We will also review
the conversion internally before sending it back to you for your
approval via a pull request.
If you prefer to convert your own vignettes, see our Contribute document for helpful tips to help with your conversion.
Please wait for Sweave2Rmd volunteers to review the pull request internally so that they can address any issues that are not specific to your package. When the pull request has passed an internal review, a volunteer will request that you as the maintainer review the pull request to request any additional changes if necessary to accept it.
After a pull request has passed your review as a maintainer, you
should merge the request on GitHub, using the
squash and merge option to reduce the commit history.
We recommend that you
BiocCheck on the package and making any changes in
a separate pull requestDESCRIPTION in a separate
commit so that the build system will recognize that a new version is
available to buildYou should follow the usual workflow of package development described at Bioconductor Packages: Development, Maintenance, and Peer Review to push to the Bioconductor repository.